Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ap4s1Q9WVL1 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Gm27920-201ENSMUST00000183953 96 ntBASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Gm27459-201ENSMUST00000184860 107 ntBASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap4s1Q9WVL1 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Gm7862-201ENSMUST00000121461 292 ntBASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap4s1Q9WVL1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Syt7-205ENSMUST00000224135 1557 ntBASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap4s1Q9WVL1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms