Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.99■□□□□ 0.15
Scn11aQ9R053 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Scn11aQ9R053 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scn11aQ9R053 Mir7032-201ENSMUST00000185154 79 ntBASIC15.99■□□□□ 0.15
Scn11aQ9R053 Gm43947-201ENSMUST00000203019 959 ntBASIC15.99■□□□□ 0.15
Scn11aQ9R053 Gm32025-201ENSMUST00000217960 307 ntBASIC15.99■□□□□ 0.15
Scn11aQ9R053 Gm10268-201ENSMUST00000085340 555 ntBASIC15.99■□□□□ 0.15
Scn11aQ9R053 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.99■□□□□ 0.15
Scn11aQ9R053 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn11aQ9R053 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn11aQ9R053 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Scn11aQ9R053 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn11aQ9R053 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn11aQ9R053 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scn11aQ9R053 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Gm12241-201ENSMUST00000118330 726 ntBASIC15.98■□□□□ 0.15
Scn11aQ9R053 Gm7809-201ENSMUST00000153199 742 ntBASIC15.98■□□□□ 0.15
Scn11aQ9R053 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.98■□□□□ 0.15
Scn11aQ9R053 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.98■□□□□ 0.15
Scn11aQ9R053 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.98■□□□□ 0.15
Scn11aQ9R053 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.98■□□□□ 0.15
Scn11aQ9R053 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Scn11aQ9R053 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Gm13786-201ENSMUST00000122371 333 ntBASIC15.97■□□□□ 0.15
Scn11aQ9R053 Gm17376-201ENSMUST00000166016 84 ntBASIC15.97■□□□□ 0.15
Scn11aQ9R053 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.97■□□□□ 0.15
Scn11aQ9R053 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.97■□□□□ 0.15
Scn11aQ9R053 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.97■□□□□ 0.15
Scn11aQ9R053 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.97■□□□□ 0.15
Scn11aQ9R053 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn11aQ9R053 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.96■□□□□ 0.15
Scn11aQ9R053 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.96■□□□□ 0.15
Scn11aQ9R053 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Gm2991-201ENSMUST00000173338 480 ntBASIC15.96■□□□□ 0.15
Scn11aQ9R053 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Gm37008-201ENSMUST00000195712 319 ntBASIC15.96■□□□□ 0.15
Scn11aQ9R053 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.96■□□□□ 0.15
Scn11aQ9R053 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn11aQ9R053 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms