Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Gm10499-201ENSMUST00000174094 934 ntBASIC10.96□□□□□ -0.65
Smco4Q9JIS3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Smco4Q9JIS3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Smco4Q9JIS3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco4Q9JIS3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco4Q9JIS3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco4Q9JIS3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Smco4Q9JIS3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Gm13168-201ENSMUST00000121771 632 ntBASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Gm27011-201ENSMUST00000182352 972 ntBASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smco4Q9JIS3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smco4Q9JIS3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms