Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm14350-201ENSMUST00000116642 640 ntBASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Gm14263-201ENSMUST00000117955 746 ntBASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Gm44064-201ENSMUST00000204964 1087 ntBASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-4Q9EQM3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Gm14017-201ENSMUST00000121934 386 ntBASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-4Q9EQM3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Gm8805-201ENSMUST00000117848 313 ntBASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Gm3890-201ENSMUST00000182416 207 ntBASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.98□□□□□ -0.17
Nkx2-4Q9EQM3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms