Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne8Q9DC53 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Gm4875-201ENSMUST00000118257 786 ntBASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpne8Q9DC53 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Gm15393-201ENSMUST00000120499 219 ntBASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Gm27430-201ENSMUST00000184585 107 ntBASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Gm10766-202ENSMUST00000194123 606 ntBASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Gm44333-201ENSMUST00000197168 107 ntBASIC14.3□□□□□ -0.12
Cpne8Q9DC53 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne8Q9DC53 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.29□□□□□ -0.12
Cpne8Q9DC53 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms