Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp2aQ9DB34 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp2aQ9DB34 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp2aQ9DB34 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp2aQ9DB34 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp2aQ9DB34 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chmp2aQ9DB34 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp2aQ9DB34 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.33□□□□□ -0.11
Chmp2aQ9DB34 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.33□□□□□ -0.11
Chmp2aQ9DB34 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp2aQ9DB34 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Chmp2aQ9DB34 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp2aQ9DB34 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp2aQ9DB34 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.33□□□□□ -0.12
Chmp2aQ9DB34 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Gm13385-201ENSMUST00000121089 220 ntBASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Gm28760-201ENSMUST00000185995 736 ntBASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Gm42612-201ENSMUST00000197986 623 ntBASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Gm43170-201ENSMUST00000199827 612 ntBASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.32□□□□□ -0.12
Chmp2aQ9DB34 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Gm17795-201ENSMUST00000214505 757 ntBASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp2aQ9DB34 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms