Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Gm15240-201ENSMUST00000118156 720 ntBASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp4bQ9D8B3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp4bQ9D8B3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Gm5867-201ENSMUST00000063197 592 ntBASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Chmp4bQ9D8B3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Mir7684-201ENSMUST00000183858 60 ntBASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Chmp4bQ9D8B3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp4bQ9D8B3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms