Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp5Q9D7S9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Gm10175-201ENSMUST00000086013 645 ntBASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Gm44891-201ENSMUST00000208817 2223 ntBASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp5Q9D7S9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chmp5Q9D7S9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Gm18049-201ENSMUST00000208909 581 ntBASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp5Q9D7S9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chmp5Q9D7S9 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp5Q9D7S9 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms