Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx47Q9CWX9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Gm13884-201ENSMUST00000118103 829 ntBASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx47Q9CWX9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Gm15590-201ENSMUST00000078419 552 ntBASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx47Q9CWX9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx47Q9CWX9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.08□□□□□ -0.15
Ddx47Q9CWX9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Gm11452-201ENSMUST00000122376 690 ntBASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Gm29741-201ENSMUST00000192667 421 ntBASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ddx47Q9CWX9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Gm44719-201ENSMUST00000206404 149 ntBASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Gm18195-201ENSMUST00000207604 706 ntBASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Mzt1-203ENSMUST00000227948 952 ntBASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx47Q9CWX9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms