Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Gm7809-201ENSMUST00000153199 742 ntBASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Gm16505-201ENSMUST00000179981 232 ntBASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Gm21769-201ENSMUST00000211922 111 ntBASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Cldnd1Q9CQX5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cldnd1Q9CQX5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.96□□□□□ -0.18
Cldnd1Q9CQX5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cldnd1Q9CQX5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.96□□□□□ -0.18
Cldnd1Q9CQX5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cldnd1Q9CQX5 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.96□□□□□ -0.18
Cldnd1Q9CQX5 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.96□□□□□ -0.18
Cldnd1Q9CQX5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Gm2231-201ENSMUST00000125661 612 ntBASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
Cldnd1Q9CQX5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Gm8805-201ENSMUST00000117848 313 ntBASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Gm22902-201ENSMUST00000158488 302 ntBASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.94□□□□□ -0.18
Cldnd1Q9CQX5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cldnd1Q9CQX5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms