Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cotl1Q9CQI6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cotl1Q9CQI6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cotl1Q9CQI6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cotl1Q9CQI6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cotl1Q9CQI6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cotl1Q9CQI6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cotl1Q9CQI6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Gm34391-201ENSMUST00000203706 907 ntBASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cotl1Q9CQI6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Gm24589-201ENSMUST00000116692 94 ntBASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Gm7230-201ENSMUST00000173026 815 ntBASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Gm5682-201ENSMUST00000173402 505 ntBASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cotl1Q9CQI6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms