Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim33Q99PP7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.66□□□□□ -0.22
Trim33Q99PP7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Gm4875-201ENSMUST00000118257 786 ntBASIC13.66□□□□□ -0.22
Trim33Q99PP7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim33Q99PP7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.65□□□□□ -0.22
Trim33Q99PP7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.65□□□□□ -0.22
Trim33Q99PP7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.65□□□□□ -0.22
Trim33Q99PP7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Mir7684-201ENSMUST00000183858 60 ntBASIC13.65□□□□□ -0.22
Trim33Q99PP7 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.65□□□□□ -0.22
Trim33Q99PP7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim33Q99PP7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim33Q99PP7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.64□□□□□ -0.23
Trim33Q99PP7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.64□□□□□ -0.23
Trim33Q99PP7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Gm15393-201ENSMUST00000120499 219 ntBASIC13.64□□□□□ -0.23
Trim33Q99PP7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Mir8102-201ENSMUST00000184148 139 ntBASIC13.64□□□□□ -0.23
Trim33Q99PP7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim33Q99PP7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim33Q99PP7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms