Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Rtn4Q99P72 AC132433.1-201ENSMUST00000221553 1101 ntBASIC17.82■□□□□ 0.44
Rtn4Q99P72 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rtn4Q99P72 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4Q99P72 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gm14938-201ENSMUST00000119482 943 ntBASIC17.81■□□□□ 0.44
Rtn4Q99P72 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gm16112-201ENSMUST00000159075 382 ntBASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gm29667-201ENSMUST00000190817 490 ntBASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gm45453-201ENSMUST00000211758 853 ntBASIC17.81■□□□□ 0.44
Rtn4Q99P72 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.81■□□□□ 0.44
Rtn4Q99P72 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4Q99P72 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Gm45210-201ENSMUST00000206401 1577 ntBASIC17.8■□□□□ 0.44
Rtn4Q99P72 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC17.8■□□□□ 0.44
Rtn4Q99P72 Gm42464-201ENSMUST00000196717 417 ntBASIC17.8■□□□□ 0.44
Rtn4Q99P72 Gm43703-201ENSMUST00000200523 763 ntBASIC17.8■□□□□ 0.44
Rtn4Q99P72 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rtn4Q99P72 AC132384.10-201ENSMUST00000217862 1204 ntBASIC17.8■□□□□ 0.44
Rtn4Q99P72 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rtn4Q99P72 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Mir125a-201ENSMUST00000083545 68 ntBASIC17.8■□□□□ 0.44
Rtn4Q99P72 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.8■□□□□ 0.44
Rtn4Q99P72 AC122539.3-201ENSMUST00000218355 1431 ntBASIC17.8■□□□□ 0.44
Rtn4Q99P72 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4Q99P72 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Gm14132-201ENSMUST00000117188 1719 ntBASIC17.79■□□□□ 0.44
Rtn4Q99P72 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Gm3760-201ENSMUST00000167475 804 ntBASIC17.79■□□□□ 0.44
Rtn4Q99P72 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Gm29036-201ENSMUST00000189967 877 ntBASIC17.79■□□□□ 0.44
Rtn4Q99P72 Gm37073-201ENSMUST00000192469 1222 ntBASIC17.79■□□□□ 0.44
Rtn4Q99P72 Gm44237-201ENSMUST00000205183 936 ntBASIC17.79■□□□□ 0.44
Rtn4Q99P72 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC17.79■□□□□ 0.44
Rtn4Q99P72 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms