Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scrt1Q99M85 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Gm18827-201ENSMUST00000188341 790 ntBASIC12.03□□□□□ -0.48
Scrt1Q99M85 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.03□□□□□ -0.48
Scrt1Q99M85 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scrt1Q99M85 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Scrt1Q99M85 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Scrt1Q99M85 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Scrt1Q99M85 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.02□□□□□ -0.48
Scrt1Q99M85 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.02□□□□□ -0.48
Scrt1Q99M85 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Scrt1Q99M85 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scrt1Q99M85 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.02□□□□□ -0.49
Scrt1Q99M85 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.02□□□□□ -0.49
Scrt1Q99M85 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Gm27847-201ENSMUST00000183711 107 ntBASIC12.02□□□□□ -0.49
Scrt1Q99M85 Gm27375-201ENSMUST00000183799 107 ntBASIC12.02□□□□□ -0.49
Scrt1Q99M85 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.02□□□□□ -0.49
Scrt1Q99M85 Gm8463-201ENSMUST00000208573 613 ntBASIC12.02□□□□□ -0.49
Scrt1Q99M85 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.02□□□□□ -0.49
Scrt1Q99M85 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.02□□□□□ -0.49
Scrt1Q99M85 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scrt1Q99M85 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.01□□□□□ -0.49
Scrt1Q99M85 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Scrt1Q99M85 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms