Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Gm12500-202ENSMUST00000186471 2428 ntBASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chmp1b1Q99LU0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chmp1b1Q99LU0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Gm17837-201ENSMUST00000186435 985 ntBASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chmp1b1Q99LU0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chmp1b1Q99LU0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms