Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdk5rap3Q99LM2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Mir497b-201ENSMUST00000093601 125 ntBASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.23□□□□□ -0.13
Cdk5rap3Q99LM2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Gm12428-201ENSMUST00000119844 727 ntBASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdk5rap3Q99LM2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Mir698-201ENSMUST00000102164 109 ntBASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Gm24158-201ENSMUST00000175263 71 ntBASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.21□□□□□ -0.13
Cdk5rap3Q99LM2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms