Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Gm8805-201ENSMUST00000117848 313 ntBASIC16.84■□□□□ 0.29
RtcbQ99LF4 Gm21769-201ENSMUST00000211922 111 ntBASIC16.84■□□□□ 0.29
RtcbQ99LF4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.84■□□□□ 0.29
RtcbQ99LF4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.84■□□□□ 0.29
RtcbQ99LF4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RtcbQ99LF4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RtcbQ99LF4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RtcbQ99LF4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Gm7809-201ENSMUST00000153199 742 ntBASIC16.83■□□□□ 0.28
RtcbQ99LF4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.83■□□□□ 0.28
RtcbQ99LF4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
RtcbQ99LF4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RtcbQ99LF4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC16.82■□□□□ 0.28
RtcbQ99LF4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.82■□□□□ 0.28
RtcbQ99LF4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.82■□□□□ 0.28
RtcbQ99LF4 Gm44069-201ENSMUST00000204898 506 ntBASIC16.82■□□□□ 0.28
RtcbQ99LF4 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.82■□□□□ 0.28
RtcbQ99LF4 Gm5363-201ENSMUST00000211927 938 ntBASIC16.82■□□□□ 0.28
RtcbQ99LF4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.82■□□□□ 0.28
RtcbQ99LF4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RtcbQ99LF4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RtcbQ99LF4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RtcbQ99LF4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RtcbQ99LF4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RtcbQ99LF4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RtcbQ99LF4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RtcbQ99LF4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RtcbQ99LF4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RtcbQ99LF4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RtcbQ99LF4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RtcbQ99LF4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms