Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd3Q99LE3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Gm11478-201ENSMUST00000117851 599 ntBASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd3Q99LE3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd3Q99LE3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd3Q99LE3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd3Q99LE3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd3Q99LE3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd3Q99LE3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd3Q99LE3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Lysmd3Q99LE3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd3Q99LE3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.21□□□□□ -0.13
Lysmd3Q99LE3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.21□□□□□ -0.13
Lysmd3Q99LE3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms