Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TrabdQ99JY4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Gm38144-201ENSMUST00000192790 465 ntBASIC14.24□□□□□ -0.13
TrabdQ99JY4 Gm7287-201ENSMUST00000205267 602 ntBASIC14.24□□□□□ -0.13
TrabdQ99JY4 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.24□□□□□ -0.13
TrabdQ99JY4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TrabdQ99JY4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.23□□□□□ -0.13
TrabdQ99JY4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Gm13829-201ENSMUST00000119600 138 ntBASIC14.23□□□□□ -0.13
TrabdQ99JY4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.23□□□□□ -0.13
TrabdQ99JY4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.23□□□□□ -0.13
TrabdQ99JY4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TrabdQ99JY4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TrabdQ99JY4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms