Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lims1Q99JW4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Gm15678-201ENSMUST00000117573 960 ntBASIC12.51□□□□□ -0.41
Lims1Q99JW4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.51□□□□□ -0.41
Lims1Q99JW4 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.51□□□□□ -0.41
Lims1Q99JW4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.51□□□□□ -0.41
Lims1Q99JW4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.51□□□□□ -0.41
Lims1Q99JW4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.51□□□□□ -0.41
Lims1Q99JW4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lims1Q99JW4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Lims1Q99JW4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.5□□□□□ -0.41
Lims1Q99JW4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.5□□□□□ -0.41
Lims1Q99JW4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.5□□□□□ -0.41
Lims1Q99JW4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Chchd1-203ENSMUST00000224633 557 ntBASIC12.5□□□□□ -0.41
Lims1Q99JW4 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.5□□□□□ -0.41
Lims1Q99JW4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.5□□□□□ -0.41
Lims1Q99JW4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lims1Q99JW4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms