Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.83□□□□□ -0.2
Cdk9Q99J95 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.83□□□□□ -0.2
Cdk9Q99J95 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdk9Q99J95 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdk9Q99J95 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.82□□□□□ -0.2
Cdk9Q99J95 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Gm27301-201ENSMUST00000184012 127 ntBASIC13.82□□□□□ -0.2
Cdk9Q99J95 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.82□□□□□ -0.2
Cdk9Q99J95 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.82□□□□□ -0.2
Cdk9Q99J95 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdk9Q99J95 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.81□□□□□ -0.2
Cdk9Q99J95 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Gm2213-201ENSMUST00000197485 688 ntBASIC13.81□□□□□ -0.2
Cdk9Q99J95 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.81□□□□□ -0.2
Cdk9Q99J95 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdk9Q99J95 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk9Q99J95 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cdk9Q99J95 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms