Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdha3Q91Y16 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdha3Q91Y16 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdha3Q91Y16 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdha3Q91Y16 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Pcdha3Q91Y16 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdha3Q91Y16 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdha3Q91Y16 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdha3Q91Y16 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Gm21854-201ENSMUST00000179901 471 ntBASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Gm9797-201ENSMUST00000052902 613 ntBASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha3Q91Y16 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha3Q91Y16 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms