Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Gm2445-201ENSMUST00000182798 989 ntBASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Gm38294-201ENSMUST00000192831 381 ntBASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Pcdha8Q91Y12 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.4□□□□□ -0.27
Pcdha8Q91Y12 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Gm15393-201ENSMUST00000120499 219 ntBASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Mir6956-201ENSMUST00000183598 62 ntBASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.39□□□□□ -0.27
Pcdha8Q91Y12 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Gm13223-201ENSMUST00000118609 747 ntBASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Gm27321-201ENSMUST00000185021 205 ntBASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Gm21470-201ENSMUST00000187680 696 ntBASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdha8Q91Y12 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms