Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.58□□□□□ -0.08
Pcdha9Q91Y11 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Gm12859-201ENSMUST00000117834 427 ntBASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Gm12485-201ENSMUST00000119641 291 ntBASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Gm26464-201ENSMUST00000157094 305 ntBASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Gm5161-201ENSMUST00000075243 853 ntBASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdha9Q91Y11 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Gm17330-201ENSMUST00000221047 165 ntBASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdha9Q91Y11 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms