Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Pcdhb1Q91Y08 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb1Q91Y08 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Mir7684-201ENSMUST00000183858 60 ntBASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdhb1Q91Y08 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Acot6-202ENSMUST00000222921 3622 ntBASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Gm27772-201ENSMUST00000184900 187 ntBASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhb1Q91Y08 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms