Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Gm15393-201ENSMUST00000120499 219 ntBASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 AC115357.1-201ENSMUST00000227575 466 ntBASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 AC132918.1-201ENSMUST00000227877 925 ntBASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb20Q91XZ9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gm15460-201ENSMUST00000118147 391 ntBASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gm23547-201ENSMUST00000158210 271 ntBASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gm44681-201ENSMUST00000208447 842 ntBASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Syt7-204ENSMUST00000223586 1344 ntBASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gm11342-203ENSMUST00000224879 1324 ntBASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb20Q91XZ9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb20Q91XZ9 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb20Q91XZ9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdhb20Q91XZ9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb20Q91XZ9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb20Q91XZ9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb20Q91XZ9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms