Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Gm38188-201ENSMUST00000192879 856 ntBASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Gm15074-201ENSMUST00000117603 936 ntBASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Gm8584-201ENSMUST00000171982 758 ntBASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Gm10154-201ENSMUST00000084445 354 ntBASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdhb3Q91XZ7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pcdhb3Q91XZ7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb3Q91XZ7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Pcdhb3Q91XZ7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb3Q91XZ7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdhb3Q91XZ7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Pcdhb3Q91XZ7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Pcdhb3Q91XZ7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Pcdhb3Q91XZ7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms