Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Gm14767-201ENSMUST00000121559 586 ntBASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Gm6888-201ENSMUST00000221983 706 ntBASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb8Q91XZ2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Gm15393-201ENSMUST00000120499 219 ntBASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Gm27680-201ENSMUST00000184192 160 ntBASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb8Q91XZ2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Mir698-201ENSMUST00000102164 109 ntBASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Gm17837-201ENSMUST00000186435 985 ntBASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb8Q91XZ2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms