Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.66■□□□□ 0.1
Trex1Q91XB0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trex1Q91XB0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trex1Q91XB0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trex1Q91XB0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trex1Q91XB0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trex1Q91XB0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trex1Q91XB0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trex1Q91XB0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trex1Q91XB0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Gm15198-201ENSMUST00000117283 177 ntBASIC15.65■□□□□ 0.1
Trex1Q91XB0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.65■□□□□ 0.1
Trex1Q91XB0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trex1Q91XB0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Gm1335-201ENSMUST00000121653 386 ntBASIC15.64■□□□□ 0.09
Trex1Q91XB0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Gm27682-201ENSMUST00000183930 110 ntBASIC15.64■□□□□ 0.09
Trex1Q91XB0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Gm18054-201ENSMUST00000207539 555 ntBASIC15.64■□□□□ 0.09
Trex1Q91XB0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trex1Q91XB0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Gm13369-201ENSMUST00000119442 987 ntBASIC15.63■□□□□ 0.09
Trex1Q91XB0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.63■□□□□ 0.09
Trex1Q91XB0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms