Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Ddx41Q91VN6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx41Q91VN6 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Ddx41Q91VN6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx41Q91VN6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Ddx41Q91VN6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Gm45384-201ENSMUST00000210451 277 ntBASIC15.76■□□□□ 0.11
Ddx41Q91VN6 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Gm19220-201ENSMUST00000222682 803 ntBASIC15.76■□□□□ 0.11
Ddx41Q91VN6 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.76■□□□□ 0.11
Ddx41Q91VN6 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx41Q91VN6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.75■□□□□ 0.11
Ddx41Q91VN6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.75■□□□□ 0.11
Ddx41Q91VN6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx41Q91VN6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Gm4804-201ENSMUST00000182234 999 ntBASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Gm18187-201ENSMUST00000196476 984 ntBASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Gm44608-201ENSMUST00000206827 855 ntBASIC15.74■□□□□ 0.11
Ddx41Q91VN6 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.74■□□□□ 0.11
Ddx41Q91VN6 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx41Q91VN6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms