Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
StrcQ8VIM6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Gm13045-201ENSMUST00000119019 712 ntBASIC15.92■□□□□ 0.14
StrcQ8VIM6 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Gm5904-201ENSMUST00000210286 865 ntBASIC15.92■□□□□ 0.14
StrcQ8VIM6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
StrcQ8VIM6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Gm27438-201ENSMUST00000183480 110 ntBASIC15.91■□□□□ 0.14
StrcQ8VIM6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.91■□□□□ 0.14
StrcQ8VIM6 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.91■□□□□ 0.14
StrcQ8VIM6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.91■□□□□ 0.14
StrcQ8VIM6 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.91■□□□□ 0.14
StrcQ8VIM6 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.91■□□□□ 0.14
StrcQ8VIM6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Gm24845-201ENSMUST00000158034 109 ntBASIC15.91■□□□□ 0.14
StrcQ8VIM6 Gm9550-201ENSMUST00000161130 862 ntBASIC15.91■□□□□ 0.14
StrcQ8VIM6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Gm7848-201ENSMUST00000210739 718 ntBASIC15.91■□□□□ 0.14
StrcQ8VIM6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
StrcQ8VIM6 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.91■□□□□ 0.14
StrcQ8VIM6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.9■□□□□ 0.14
StrcQ8VIM6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Gm3508-201ENSMUST00000186012 792 ntBASIC15.9■□□□□ 0.14
StrcQ8VIM6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Rprl1-202ENSMUST00000198476 238 ntBASIC15.9■□□□□ 0.14
StrcQ8VIM6 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
StrcQ8VIM6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.14
StrcQ8VIM6 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Gm13996-201ENSMUST00000118456 430 ntBASIC15.89■□□□□ 0.13
StrcQ8VIM6 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.89■□□□□ 0.13
StrcQ8VIM6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.89■□□□□ 0.13
StrcQ8VIM6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.89■□□□□ 0.13
StrcQ8VIM6 Gm45219-201ENSMUST00000205602 465 ntBASIC15.89■□□□□ 0.13
StrcQ8VIM6 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.89■□□□□ 0.13
StrcQ8VIM6 Gm5369-201ENSMUST00000217499 588 ntBASIC15.89■□□□□ 0.13
StrcQ8VIM6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
StrcQ8VIM6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
StrcQ8VIM6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms