Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Gm44608-201ENSMUST00000206827 855 ntBASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rpa1Q8VEE4 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.82□□□□□ -0.2
Rpa1Q8VEE4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm15957-201ENSMUST00000118893 974 ntBASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms