Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lsm1Q8VC85 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Gm27533-201ENSMUST00000183800 152 ntBASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Gm21470-201ENSMUST00000187680 696 ntBASIC13.17□□□□□ -0.3
Lsm1Q8VC85 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Gm5312-201ENSMUST00000203728 547 ntBASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lsm1Q8VC85 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Gm27622-201ENSMUST00000183779 60 ntBASIC13.16□□□□□ -0.3
Lsm1Q8VC85 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm1Q8VC85 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm1Q8VC85 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms