Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc9Q8VC31 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc9Q8VC31 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc9Q8VC31 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc9Q8VC31 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc9Q8VC31 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc9Q8VC31 Gm37437-201ENSMUST00000194451 1937 ntBASIC16.49■□□□□ 0.23
Ccdc9Q8VC31 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc9Q8VC31 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Gm27867-201ENSMUST00000184778 125 ntBASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Gm43051-201ENSMUST00000201096 2678 ntBASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Gm7104-201ENSMUST00000179741 2532 ntBASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc9Q8VC31 AC211878.3-201ENSMUST00000222629 2018 ntBASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 CT573086.2-201ENSMUST00000227277 4992 ntBASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc9Q8VC31 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc9Q8VC31 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Ccdc9Q8VC31 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.46■□□□□ 0.22
Ccdc9Q8VC31 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc9Q8VC31 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms