Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Mir7684-201ENSMUST00000183858 60 ntBASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Mir8102-201ENSMUST00000184148 139 ntBASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.42■□□□□ 0.22
Top1mtQ8R4U6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Mir7023-201ENSMUST00000185093 64 ntBASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Gm29667-201ENSMUST00000190817 490 ntBASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Gm18905-201ENSMUST00000205454 928 ntBASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Top1mtQ8R4U6 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Gm27838-201ENSMUST00000184829 128 ntBASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Gm17795-201ENSMUST00000214505 757 ntBASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Top1mtQ8R4U6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Gm20445-201ENSMUST00000061905 565 ntBASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Top1mtQ8R4U6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms