Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup85Q8R480 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup85Q8R480 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nup85Q8R480 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nup85Q8R480 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup85Q8R480 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nup85Q8R480 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup85Q8R480 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nup85Q8R480 Gm11424-201ENSMUST00000121929 829 ntBASIC14.12□□□□□ -0.15
Nup85Q8R480 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup85Q8R480 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.12□□□□□ -0.15
Nup85Q8R480 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.12□□□□□ -0.15
Nup85Q8R480 Gm6218-201ENSMUST00000219812 628 ntBASIC14.12□□□□□ -0.15
Nup85Q8R480 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.12□□□□□ -0.15
Nup85Q8R480 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nup85Q8R480 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nup85Q8R480 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup85Q8R480 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.11□□□□□ -0.15
Nup85Q8R480 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.11□□□□□ -0.15
Nup85Q8R480 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.11□□□□□ -0.15
Nup85Q8R480 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.11□□□□□ -0.15
Nup85Q8R480 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Nup85Q8R480 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup85Q8R480 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nup85Q8R480 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.1□□□□□ -0.15
Nup85Q8R480 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nup85Q8R480 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nup85Q8R480 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms