Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.26■□□□□ 0.67
Cd109Q8R422 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC19.26■□□□□ 0.67
Cd109Q8R422 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cd109Q8R422 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC19.26■□□□□ 0.67
Cd109Q8R422 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cd109Q8R422 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Cd109Q8R422 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cd109Q8R422 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC19.25■□□□□ 0.67
Cd109Q8R422 Cts7-204ENSMUST00000225321 1257 ntBASIC19.25■□□□□ 0.67
Cd109Q8R422 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cd109Q8R422 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cd109Q8R422 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cd109Q8R422 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC19.25■□□□□ 0.67
Cd109Q8R422 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC19.25■□□□□ 0.67
Cd109Q8R422 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC19.25■□□□□ 0.67
Cd109Q8R422 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Gm43822-201ENSMUST00000200285 476 ntBASIC19.25■□□□□ 0.67
Cd109Q8R422 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC19.25■□□□□ 0.67
Cd109Q8R422 Gm3961-201ENSMUST00000204425 994 ntBASIC19.25■□□□□ 0.67
Cd109Q8R422 AC134335.2-201ENSMUST00000227660 440 ntBASIC19.25■□□□□ 0.67
Cd109Q8R422 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cd109Q8R422 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd109Q8R422 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Cd109Q8R422 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cd109Q8R422 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Gm13350-201ENSMUST00000120519 479 ntBASIC19.24■□□□□ 0.67
Cd109Q8R422 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC19.24■□□□□ 0.67
Cd109Q8R422 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Gm38158-201ENSMUST00000194617 339 ntBASIC19.24■□□□□ 0.67
Cd109Q8R422 Gm43758-201ENSMUST00000199500 367 ntBASIC19.24■□□□□ 0.67
Cd109Q8R422 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC19.24■□□□□ 0.67
Cd109Q8R422 Gm43423-201ENSMUST00000198390 2094 ntBASIC19.24■□□□□ 0.67
Cd109Q8R422 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC19.24■□□□□ 0.67
Cd109Q8R422 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd109Q8R422 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cd109Q8R422 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cd109Q8R422 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cd109Q8R422 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC19.23■□□□□ 0.67
Cd109Q8R422 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Cd109Q8R422 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC19.23■□□□□ 0.67
Cd109Q8R422 Gm9431-201ENSMUST00000119765 1051 ntBASIC19.23■□□□□ 0.67
Cd109Q8R422 Gm11591-201ENSMUST00000120063 702 ntBASIC19.23■□□□□ 0.67
Cd109Q8R422 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cd109Q8R422 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC19.23■□□□□ 0.67
Cd109Q8R422 Gm29396-201ENSMUST00000185659 716 ntBASIC19.23■□□□□ 0.67
Cd109Q8R422 Gm28693-202ENSMUST00000190758 331 ntBASIC19.23■□□□□ 0.67
Cd109Q8R422 Gm38266-201ENSMUST00000194931 421 ntBASIC19.23■□□□□ 0.67
Cd109Q8R422 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cd109Q8R422 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd109Q8R422 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms