Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc58Q8R3Q6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Gm21362-201ENSMUST00000194272 928 ntBASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc58Q8R3Q6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Gm15483-201ENSMUST00000120338 456 ntBASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Gm27920-201ENSMUST00000183953 96 ntBASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Gm18195-201ENSMUST00000207604 706 ntBASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Gm7461-201ENSMUST00000058918 827 ntBASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc58Q8R3Q6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms