Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 AA543401-201ENSMUST00000164248 1269 ntBASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Gm29741-201ENSMUST00000192667 421 ntBASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nudcd3Q8R1N4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Nudcd3Q8R1N4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.71□□□□□ -0.22
Nudcd3Q8R1N4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd3Q8R1N4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd3Q8R1N4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd3Q8R1N4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd3Q8R1N4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd3Q8R1N4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Nudcd3Q8R1N4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 BC001981-202ENSMUST00000191393 1545 ntBASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Gm20553-201ENSMUST00000204205 844 ntBASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Gm44719-201ENSMUST00000206404 149 ntBASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd3Q8R1N4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 AA619741-201ENSMUST00000195095 646 ntBASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd3Q8R1N4 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms