Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.71□□□□□ -0.21
Zcchc9Q8R1J3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Zcchc9Q8R1J3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Zcchc9Q8R1J3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Zcchc9Q8R1J3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Zcchc9Q8R1J3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Zcchc9Q8R1J3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Zcchc9Q8R1J3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Zcchc9Q8R1J3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Zcchc9Q8R1J3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Zcchc9Q8R1J3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Zcchc9Q8R1J3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Zcchc9Q8R1J3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zcchc9Q8R1J3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zcchc9Q8R1J3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.71□□□□□ -0.22
Zcchc9Q8R1J3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Zcchc9Q8R1J3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.7□□□□□ -0.22
Zcchc9Q8R1J3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Gm12742-201ENSMUST00000117326 410 ntBASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Gm12390-201ENSMUST00000117897 397 ntBASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Mir1894-201ENSMUST00000122802 81 ntBASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Mir6420-201ENSMUST00000185032 102 ntBASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Gm17794-201ENSMUST00000220252 955 ntBASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Zcchc9Q8R1J3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Gm18905-201ENSMUST00000205454 928 ntBASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Gm18027-201ENSMUST00000218947 619 ntBASIC13.68□□□□□ -0.22
Zcchc9Q8R1J3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms