Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Mir8102-201ENSMUST00000184148 139 ntBASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.2■□□□□ 0.18
Atf7Q8R0S1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atf7Q8R0S1 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.19■□□□□ 0.18
Atf7Q8R0S1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Gm27838-201ENSMUST00000184829 128 ntBASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atf7Q8R0S1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Gm21854-201ENSMUST00000179901 471 ntBASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Mir7023-201ENSMUST00000185093 64 ntBASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Gm29667-201ENSMUST00000190817 490 ntBASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Gm17795-201ENSMUST00000214505 757 ntBASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atf7Q8R0S1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atf7Q8R0S1 Gm27772-201ENSMUST00000184900 187 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms