Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3a1Q8K4Z5 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sf3a1Q8K4Z5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sf3a1Q8K4Z5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sf3a1Q8K4Z5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sf3a1Q8K4Z5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms