Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ebf4Q8K4J2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Gm15173-201ENSMUST00000122049 433 ntBASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Gm6550-201ENSMUST00000187574 993 ntBASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ebf4Q8K4J2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Gm27300-201ENSMUST00000184085 97 ntBASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Gm27335-201ENSMUST00000184758 97 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms