Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.96□□□□□ -0.33
Clrn1Q8K445 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Gm14057-201ENSMUST00000120631 482 ntBASIC12.96□□□□□ -0.33
Clrn1Q8K445 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.96□□□□□ -0.33
Clrn1Q8K445 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Clrn1Q8K445 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.96□□□□□ -0.34
Clrn1Q8K445 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clrn1Q8K445 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clrn1Q8K445 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clrn1Q8K445 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clrn1Q8K445 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Clrn1Q8K445 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Clrn1Q8K445 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.96□□□□□ -0.34
Clrn1Q8K445 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Clrn1Q8K445 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.95□□□□□ -0.34
Clrn1Q8K445 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Gm9522-201ENSMUST00000182394 926 ntBASIC12.95□□□□□ -0.34
Clrn1Q8K445 Gm27838-201ENSMUST00000184829 128 ntBASIC12.95□□□□□ -0.34
Clrn1Q8K445 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Gm10576-201ENSMUST00000191927 825 ntBASIC12.95□□□□□ -0.34
Clrn1Q8K445 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.95□□□□□ -0.34
Clrn1Q8K445 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Clrn1Q8K445 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.94□□□□□ -0.34
Clrn1Q8K445 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.94□□□□□ -0.34
Clrn1Q8K445 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.94□□□□□ -0.34
Clrn1Q8K445 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.94□□□□□ -0.34
Clrn1Q8K445 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.94□□□□□ -0.34
Clrn1Q8K445 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.94□□□□□ -0.34
Clrn1Q8K445 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Gm20445-201ENSMUST00000061905 565 ntBASIC12.94□□□□□ -0.34
Clrn1Q8K445 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clrn1Q8K445 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms