Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.77□□□□□ -0.53
Lrrtm1Q8K377 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Gm14140-201ENSMUST00000119999 995 ntBASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Rpph1-201ENSMUST00000175096 319 ntBASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrrtm1Q8K377 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Gm6973-201ENSMUST00000117080 721 ntBASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Gm44492-201ENSMUST00000197012 141 ntBASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lrrtm1Q8K377 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms