Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ShfQ8CG80 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.25□□□□□ -0.45
ShfQ8CG80 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.24□□□□□ -0.45
ShfQ8CG80 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ShfQ8CG80 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Gm4995-201ENSMUST00000117247 432 ntBASIC12.24□□□□□ -0.45
ShfQ8CG80 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.24□□□□□ -0.45
ShfQ8CG80 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Gm24158-201ENSMUST00000175263 71 ntBASIC12.24□□□□□ -0.45
ShfQ8CG80 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Gm27525-201ENSMUST00000184465 107 ntBASIC12.24□□□□□ -0.45
ShfQ8CG80 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.24□□□□□ -0.45
ShfQ8CG80 Gm44335-201ENSMUST00000196879 141 ntBASIC12.24□□□□□ -0.45
ShfQ8CG80 Gm44297-201ENSMUST00000198304 141 ntBASIC12.24□□□□□ -0.45
ShfQ8CG80 Gm44346-201ENSMUST00000198851 141 ntBASIC12.24□□□□□ -0.45
ShfQ8CG80 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.24□□□□□ -0.45
ShfQ8CG80 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.24□□□□□ -0.45
ShfQ8CG80 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.24□□□□□ -0.45
ShfQ8CG80 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ShfQ8CG80 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
ShfQ8CG80 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ShfQ8CG80 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.23□□□□□ -0.45
ShfQ8CG80 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ShfQ8CG80 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.23□□□□□ -0.45
ShfQ8CG80 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.23□□□□□ -0.45
ShfQ8CG80 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.23□□□□□ -0.45
ShfQ8CG80 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.23□□□□□ -0.45
ShfQ8CG80 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.23□□□□□ -0.45
ShfQ8CG80 AW822252-206ENSMUST00000208904 237 ntBASIC12.23□□□□□ -0.45
ShfQ8CG80 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.23□□□□□ -0.45
ShfQ8CG80 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ShfQ8CG80 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
ShfQ8CG80 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.23□□□□□ -0.45
ShfQ8CG80 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.23□□□□□ -0.45
ShfQ8CG80 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ShfQ8CG80 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ShfQ8CG80 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ShfQ8CG80 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms