Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.31□□□□□ -0.28
SynpoQ8CC35 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.31□□□□□ -0.28
SynpoQ8CC35 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SynpoQ8CC35 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.3□□□□□ -0.28
SynpoQ8CC35 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.3□□□□□ -0.28
SynpoQ8CC35 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.3□□□□□ -0.28
SynpoQ8CC35 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Gm12859-201ENSMUST00000117834 427 ntBASIC13.3□□□□□ -0.28
SynpoQ8CC35 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.3□□□□□ -0.28
SynpoQ8CC35 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Gm6218-201ENSMUST00000219812 628 ntBASIC13.3□□□□□ -0.28
SynpoQ8CC35 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SynpoQ8CC35 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.29□□□□□ -0.28
SynpoQ8CC35 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SynpoQ8CC35 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Gm28631-201ENSMUST00000190740 334 ntBASIC13.29□□□□□ -0.28
SynpoQ8CC35 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.29□□□□□ -0.28
SynpoQ8CC35 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.29□□□□□ -0.28
SynpoQ8CC35 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SynpoQ8CC35 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms