Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Gm38223-201ENSMUST00000194484 695 ntBASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Gm24447-201ENSMUST00000083977 338 ntBASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.36□□□□□ -0.43
Col6a6Q8C6K9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Gm18753-201ENSMUST00000201000 566 ntBASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Gm7046-201ENSMUST00000221351 977 ntBASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a6Q8C6K9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Gm29741-201ENSMUST00000192667 421 ntBASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a6Q8C6K9 Gm37497-201ENSMUST00000195830 798 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms