Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rft1Q8C3B8 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rft1Q8C3B8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm22065-201ENSMUST00000103753 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm22066-201ENSMUST00000103761 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm24932-201ENSMUST00000103763 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm24115-201ENSMUST00000103799 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm22190-201ENSMUST00000103827 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm22191-201ENSMUST00000103831 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm24721-201ENSMUST00000103849 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm28018-201ENSMUST00000103869 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm26399-201ENSMUST00000103937 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Mir449b-201ENSMUST00000104833 80 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm25349-201ENSMUST00000177728 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm23616-201ENSMUST00000177797 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm25871-201ENSMUST00000177816 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm24752-201ENSMUST00000178240 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm24496-201ENSMUST00000178287 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm25649-201ENSMUST00000178476 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm25548-201ENSMUST00000178681 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm23147-201ENSMUST00000178841 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm26095-201ENSMUST00000179270 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm22171-201ENSMUST00000179283 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm23936-201ENSMUST00000179354 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm22619-201ENSMUST00000179516 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm25255-201ENSMUST00000179579 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm24755-201ENSMUST00000179691 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm26506-201ENSMUST00000179692 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm25086-201ENSMUST00000179931 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm23243-201ENSMUST00000180047 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm24659-201ENSMUST00000180212 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm24169-201ENSMUST00000180244 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm23689-201ENSMUST00000180354 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm27359-201ENSMUST00000184153 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm27785-201ENSMUST00000184268 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm27466-201ENSMUST00000184396 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm27703-201ENSMUST00000184836 110 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Gm45098-201ENSMUST00000207179 657 ntBASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rft1Q8C3B8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms