Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm2495-201ENSMUST00000191160 466 ntBASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm5035-201ENSMUST00000215581 927 ntBASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdk5rap1Q8BTW8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap1Q8BTW8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap1Q8BTW8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap1Q8BTW8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap1Q8BTW8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdk5rap1Q8BTW8 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm14127-201ENSMUST00000117906 678 ntBASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm27892-201ENSMUST00000185017 106 ntBASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdk5rap1Q8BTW8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Mir1894-201ENSMUST00000122802 81 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm6244-201ENSMUST00000178732 841 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm38223-201ENSMUST00000194484 695 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm44719-201ENSMUST00000206404 149 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm6983-201ENSMUST00000214912 628 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm5161-201ENSMUST00000075243 853 ntBASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdk5rap1Q8BTW8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms